Matras : Pairwise 3D Alignment
Pairwise 3D Alignment
Input PDBcode/filename of protein tertiary structure pair.
Protein A
PDBcode
File_upload
Chain
(range from
to
[optional])
Protein B
PDBcode
File_upload
Chain
(range from
to
[optional])
Options
Superimposed Atoms:
Only Main Chain
Full Atom in PDB file
Sequence Alignment(BLOSUM62):
off
on
PDBcode :
PDBcode (lower alphabet) + Chain Identifier(upper alphabet)
When an entry contains only one chain, the chain identifier must be "-".
ex) Hemoglobin (4hhb) alpha chain -> "4hhbA", Myoglobin (1mbd) -> "1mbd-".
Comments and Questions to :
->
Go to HELP page
->
Back to MATRAS title page